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SequenceFile
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IGVFFI2087KHEK
IGVFFI2087KHEK
released
validated
Json view
File Set
IGVFDS7538AGGA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8524
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8524_R1
md5sum
2c86d538312bd82ee5424d8668c07e6b
Content MD5sum
6e45ecc0a9cc74ab3c73f04e3fb9ad50
File Size
459 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2354_L1_SS-PKR-208_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8524
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
10271987
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7197HNOO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8713DKAQ
yaml
seqspec
seqspec of IGVFFI2087KHEK, IGVFFI7116IXIY, IGVFFI1368MJJM
Jason Buenrostro, Broad
1.3 KB
validated