Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2086NWUV
IGVFFI2086NWUV
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS4099RLTS
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 223
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC3_snRNA_S1_I2
md5sum
a6fe16bb18a62f9fa7ec5cac2cbd04c7
Content MD5sum
f37c3c6cb3d04bce0de4672aedfd5253
File Size
1.9 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX15-SC3/BH73JJDSX3_ICJY07/XHLT1-POOL-XX15-SC3-GEX_S6_L002_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
223
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
302239791
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5737IONT
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 34.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 23.0 years) peripheral blood mononuclear cell; ... and 18 more samples