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INDEXED
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SequenceFile
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IGVFFI2080AZSU
IGVFFI2080AZSU
released
validated
Json view
File Set
IGVFDS9931JAJO
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8352
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8352_R2
md5sum
5cc798417d48b07152693f64149bbbe3
Content MD5sum
dfd9130adcc1882409c00669ed62be2c
File Size
682 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2238_L8_SS-PKR-584_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8352
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
12234707
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1865KZPO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4101FQNX
yaml
seqspec
seqspec of IGVFFI0324KRDV, IGVFFI2080AZSU
Jason Buenrostro, Broad
1.3 KB
validated