IGVFFI2047DLKT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3484DNVB(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G5_P060_L007_R2

md5sum

fe72d1641d7ce3361808a5c9e80f59e1

Content MD5sum

b614d622120b0f38f1651d823c5b671d

File Size

3.8 GB

Submitted File Name

Multiome_RNA_RP011_G5_L004_P060_S28_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

90154129

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0643EUKR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples