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IGVFFI2037WBYB

released
validated
File Set
IGVFDS7165EWYS(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 1730
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1730_R2
buenrostro-bernstein:SS-LS_1730_R2
md5sum
e4f581343e0a5506656201f78f75c860
Content MD5sum
81d187b927b9965e68a1bd52877e6c43
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1131_L4_SS-PKR-6_SS-V2-PLATE2-1st-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1730
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
24378166

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (49 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad