IGVFFI2031KHXX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8353JJNR(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G3_P056_L008_R2

md5sum

4fbbf521b38f821ec7b495d33909c019

Content MD5sum

16469632ac0127dbc4abf9521042be23

File Size

2.3 GB

Submitted File Name

Multiome_RNA_RP007_G3_L003_P056_S90_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

53160123

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7646ONHX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples