Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI2020FEQU
IGVFFI2020FEQU
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0287IEKR
(10x multiome with scMito-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
leif-ludwig:measurement2306520006_scRNA_R1
md5sum
927dc70f22cb9a5b1bc3fc1181248918
Content MD5sum
aae3a9da750fbecafddb886cb73a4cc6
File Size
7.2 GB
Submitted File Name
/data/cephfs-1/scratch/groups/ludwig/Josch/IGVF_aging_fastq_final/SCT_2306520006_Y70F_mtMultiome_GEX_S1_L001_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Leif Ludwig, MDC
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X Plus
Sequencing Run
1
Flowcell ID
22T5CCLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
374663890
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1705OPIJ
PrimaryCell
peripheral blood mononuclear cell
Homo sapiens (female, 70 years) peripheral blood mononuclear cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7670ZJLA
yaml
seqspec
seqspec of IGVFFI2020FEQU, IGVFFI8771IDCN
Leif Ludwig, MDC
1.5 KB
validated