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IGVFFI2019MGNR

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2630GWQK(CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting genes in many genomic loci)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:sequence_file-teloHAEC_2kG_library-NovaSeq1-scRNAseq_2kG_11AMDox_6_S1_L001_R1_001.fastq.gz
md5sum
2e5445aad1ffee8cd3fe9c5aa53b7828
Content MD5sum
828788af5d7d65b5505172837e243778
File Size
9.1 GB
Submitted File Name
/oak/stanford/groups/engreitz/Users/kangh/TeloHAEC_Perturb-seq_2kG/210528_Broad_fastq/scRNAseq_2kG_11AMDox_6_S1_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
32
Read Count
435386760

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
TeloHAEC cell line, female, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, transfected with a guide library

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford