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INDEXED
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SequenceFile
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IGVFFI2017WNYH
IGVFFI2017WNYH
released
validated
Json view
File Set
IGVFDS9037YGVR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8350
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8350_R1
md5sum
a0b5cc2030098511a043b7915f420b28
Content MD5sum
505d88e06678ad8f46eb767d38b0d7b1
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2236_L8_SS-PKR-583_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8350
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
27180668
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3008DKJO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3396JOOQ
yaml
seqspec
seqspec of IGVFFI2017WNYH, IGVFFI7020LGOW
Jason Buenrostro, Broad
1.2 KB
validated