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IGVFFI2016FQDT

released
validated
File Set
IGVFDS8787HYOO(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
2202ccfe159194a318f2ed08546cfbc7
Content MD5sum
d10e0a3a6971eee24cac07bf7407a1e3
File Size
6.6 GB
Submitted File Name
igvf_003/nova2/igvf_003_B04_D_nova_N2_L001_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Flowcell ID
HJ73MDSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
184283511

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; Mus musculus 129S1J (male, 72 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7529AMUV, IGVFFI2016FQDT
Ali Mortazavi, UCI
1.4 KB
validated