IGVFFI2010CCJC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9074SVYE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G8_P072_L002_I2

md5sum

15545f403129736e4b7e8f2e003a6953

Content MD5sum

a1e5a7bc4eeef78b0cf5808333534021

File Size

1.4 GB

Submitted File Name

Multiome_RNA_X053_G8_L008_P072_S12_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

172428944

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8322GNNB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples