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IGVFFI2009ACET

released
validated
File Set
IGVFDS5358BMMQ(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
7d068149631d4d7d602cb0c1e42f30f2
Content MD5sum
5dd60c5d2f7d444c707c54516d4b1b17
File Size
8.4 GB
Submitted File Name
igvf_008b/nova1/igvf_008b_B09_D_nova_N1_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H5VF5DSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
243547581

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus AJ (male, 69 days) epididymis tissue; Mus musculus PWK/PhJ (female, 69 days) oviduct tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2009ACET, IGVFFI9386ZOIC
Ali Mortazavi, UCI
1.4 KB
validated