IGVFFI2008XKNT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0571RKTK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G3_P052_L004_R2

md5sum

5adfeaddce9a66383fdc8090383ed419

Content MD5sum

d1d9b2297d39fd83b4f0af25998c3da5

File Size

1.4 GB

Submitted File Name

Multiome_RNA_RP001_G3_L003_P052_S3_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

33758594

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8767PGTT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples