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IGVFFI2001SFNQ

released
validated
File Set
IGVFDS9698PDND(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1524
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1524_R1
buenrostro-bernstein:SS-LS_1524_R1
md5sum
da0fc68320c6254e1ac12d8e96131bdb
Content MD5sum
4b1c66069d0d4d010fb565497e38ace6
File Size
850 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1117_L2_SS-PKR-5_SS-V1-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1524
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
40995662

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad