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INDEXED
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SequenceFile
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IGVFFI1995HOSX
IGVFFI1995HOSX
released
validated
Json view
File Set
IGVFDS3442XUWG
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4326
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4326_R1
md5sum
fbea1d8f1d276e4d416473d1bc929e32
Content MD5sum
efe065dee7fb599ce913a8068e51898d
File Size
3.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-533_L1_SS-PKR-170_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4326
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
52714836
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9117YPYG
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4975POKE
yaml
seqspec
seqspec of IGVFFI1995HOSX, IGVFFI3239ZSNP, IGVFFI3426ZSVA
Jason Buenrostro, Broad
1.3 KB
validated