IGVFFI1992NQCS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5259BNNW(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X046_G4_P048_L004_R2

md5sum

d7304f8363ec165a7b2e347fa414bec6

Content MD5sum

2f9c1c60c1f21913ff49596daab8e4ee

File Size

11 GB

Submitted File Name

Multiome_RNA_X046_G4_L004_P048_S16_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

226987310

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6731GWSI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 78 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 53 years) middle temporal gyrus tissue; ... and 10 more samples