Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1990GLBU
IGVFFI1990GLBU
released
validated
Json view
File Set
IGVFDS7538AGGA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8908
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8908_R1
md5sum
645e727d68503638ba2beb89957ff664
Content MD5sum
88539b615cb81e61a426d5483992c2c3
File Size
445 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2354_L5_SS-PKR-208_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8908
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
9836314
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7197HNOO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4119NIED
yaml
seqspec
seqspec of IGVFFI1990GLBU, IGVFFI9686XJAZ, IGVFFI9395FNUX
Jason Buenrostro, Broad
1.3 KB
validated