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SequenceFile
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IGVFFI1989KZZO
IGVFFI1989KZZO
released
validated
Json view
File Set
IGVFDS0096YSHI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8640
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8640_R1
md5sum
6db7caf710e16594bc9db37a34c3efbc
Content MD5sum
5f0cbf23cc638816bd5394459e9c8f2d
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2278_L3_SS-PKR-176_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8640
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
30391036
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3336NBXR
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4496EMPP
yaml
seqspec
seqspec of IGVFFI1989KZZO, IGVFFI6141ALAO, IGVFFI3351KFOK
Jason Buenrostro, Broad
1.3 KB
validated