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IGVFFI1963GAGB

released
validated
File Set
IGVFDS8161SJZG(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
9acc7a9f8d1c62b7b7d504080ff6e4d9
Content MD5sum
c9cfe2d25725a60ff2636aa6c1795859
File Size
5.3 GB
Submitted File Name
igvf_005/nova1/igvf_005_B16_D_nova_N1_L003_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
HV22FDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
149896486

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1963GAGB, IGVFFI8126GQYM
Ali Mortazavi, UCI
1.4 KB
validated