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IGVFFI1943HLZA

released
validated
File Set
IGVFDS1656AIJU(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2424
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2424_R1
buenrostro-bernstein:SS-LS_2424_R1
md5sum
c72732dbac88ca18e074bbd4536a7059
Content MD5sum
7bcf94562e82345303643dbc878758be
File Size
384 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-92_L2_SS-PKR-8_SS-V2-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2424
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
19566199

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (49 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad