IGVFFI1941NHLE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3802KJSR(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP014_G5_P061_L002_R2

md5sum

4e01003b0b8603294b0f99587af197e3

Content MD5sum

e98c35359e155eabaed7257f41089b99

File Size

895 MB

Submitted File Name

Multiome_ATAC_RP014_G5_L005_P061_S13_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257VGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

51075349

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5142KRLD

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples