IGVFFI1941EWUW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5908UEFP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G6_P006_L002_R2

md5sum

e4c7370548d481f0340d7b5690897f19

Content MD5sum

6d8a1c86ce1fad71d097d776225445a7

File Size

11 GB

Submitted File Name

Multiome_RNA_X007_G6_L006_P006_S16_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

100

Read Count

213818488

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9600LBOY

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples