IGVFFI1929LHXO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2146EWJJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X012_G6_P012_L004_I2

md5sum

5debeaf711c7be772921c0c7a41120de

Content MD5sum

1332a6da02a8f39ec014899c01bd1019

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X012_G6_L006_P012_S16_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

183348861

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4152BKDQ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue; Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples