IGVFFI1918JTRF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9639FMLS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G5_P062_L005_R1

md5sum

22320273d2d38515ac7d432c684fbdc4

Content MD5sum

0d9044ef18e075057de9c214cb465850

File Size

1.7 GB

Submitted File Name

Multiome_RNA_RP013_G5_L005_P062_S25_L005_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

86526078

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8342TFWF

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples