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INDEXED
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SequenceFile
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IGVFFI1917MNZP
IGVFFI1917MNZP
released
validated
Json view
File Set
IGVFDS3227QLAU
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P011-R2
md5sum
c6385363aeff77bc96eac108e76d8062
Content MD5sum
c6ced9afde310a0859b64614b1c6a853
File Size
9.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool11.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
56937739
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4472HHUS
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
8.6 GB
validated
IGVFFI8123BIZD
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
8.3 GB
validated