IGVFFI1916HHWZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6715SKDT(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP020_G3_P066_L005_I1

md5sum

9a4d9bdfe06b848c9df31d276cc2652e

Content MD5sum

825788ff301397f3b1b4044907a8cc5f

File Size

517 MB

Submitted File Name

Multiome_RNA_RP020_G3_L003_P066_S21_L005_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

2257GYLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

95479758

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9011XOSL

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (male, 84 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples