IGVFFI1910PQSH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1909GMRJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G1_P054_L008_R1

md5sum

27cba732cc831058ab801ba1d0b2da8e

Content MD5sum

37b1967c0104625e3990ac7b505ebedb

File Size

968 MB

Submitted File Name

Multiome_RNA_RP005_G1_L001_P054_S36_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

49155916

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7341RHCE

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples