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IGVFFI1900UXMM

released
validated
File Set
IGVFDS2476NYCP(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1608
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1608_R1
buenrostro-bernstein:SS-LS_1608_R1
md5sum
32f0da32283b924a2759bb8183f648e0
Content MD5sum
11d6625b7e2b73b00898f61d91436d63
File Size
954 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1105_L3_SS-PKR-4_SS-V1-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1608
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
45821587

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad