{
"@context": "/terms/",
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],
"accession": "IGVFFI1898QYOM",
"aliases": [
"jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-THP1-PE2_Exp4_NegControl-PCRrep2_R1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI1898QYOM](/sequence-files/IGVFFI1898QYOM/) has in progress subobject auxiliary set [IGVFDS3821IGRL](/auxiliary-sets/IGVFDS3821IGRL/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI1898QYOM/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "9e6238f04cfb747459fbc03a0887f4dd",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T08:18:18.975545+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS3821IGRL/",
"file_size": 8632731,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI1898QYOM/@@download/IGVFFI1898QYOM.fastq.gz",
"illumina_read_type": "R1",
"index": "AGGTTATC:TTGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "02192eeab48147953b0df84a654c74c1",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 253854,
"release_timestamp": "2023-12-21T01:23:58.548983+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/d501647d-2bac-4cf9-b1e5-e804eb61f4e6/IGVFFI1898QYOM.fastq.gz",
"schema_version": "14",
"seqspecs": [],
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"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
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"summary": "R1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "d501647d-2bac-4cf9-b1e5-e804eb61f4e6"
}