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IGVFFI1897DUGC

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9328ATOD(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 246
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC3_snATAC_S0_R3
md5sum
e80347ce0aaf941fcf90b0b155ff7dff
Content MD5sum
8a0b9b0de465ff38148da2d48a09311f
File Size
14 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX16-SC3/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX16-SC3-ATAC_S10_L001_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
246
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
288292973

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF