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INDEXED
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SequenceFile
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IGVFFI1893BCCF
IGVFFI1893BCCF
released
validated
Json view
File Set
IGVFDS5322OLLW
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 917
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_917_R1
md5sum
f2a04fe012a0a2c1376914fae1d99387
Content MD5sum
1b9684b72f6773822052f4aa1a593059
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-930_L6_SS-PKR-205_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
917
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
17083285
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0356QINW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8553RSYW
yaml
seqspec
seqspec of IGVFFI1893BCCF, IGVFFI1643HXDL, IGVFFI0307UPZB
Jason Buenrostro, Broad
1.4 KB
validated