Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1888MSPD
IGVFFI1888MSPD
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0217CJQJ
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 389
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX3-SC2_snRNA_S0_I2
md5sum
e39afabf1c16885df615f8e7ba4a1788
Content MD5sum
de6be1847770325a65b317eb51d981a4
File Size
1.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX3-SC2/AHM2T2DSX2/XHLT1-POOL-XX3-SC2-GEX_S10_L001_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
389
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
183932811
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4434DRKC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples