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INDEXED
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SequenceFile
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IGVFFI1887QOUN
IGVFFI1887QOUN
released
validated
Json view
File Set
IGVFDS4752BWME
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5378
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5378_R2
md5sum
742d3ecb19363ba896034f9d4fed2da0
Content MD5sum
6cc1e0720e0eb7e4dca76071f0ad4904
File Size
12 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1592_L4_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5378
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
165671278
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4024AMLP
yaml
seqspec
seqspec of IGVFFI2687PPWC, IGVFFI1887QOUN
Jason Buenrostro, Broad
1.3 KB
validated