IGVFFI1885IQDV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5127RSAZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G6_P062_L008_R1

md5sum

60ca5374542fb2e549d63687f4e2dab9

Content MD5sum

ac84b636835d0ec1d37fe219d5c2c3dd

File Size

843 MB

Submitted File Name

Multiome_RNA_RP013_G6_L006_P062_S26_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

44029440

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6292QYDO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples