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INDEXED
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SequenceFile
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IGVFFI1875ZHNV
IGVFFI1875ZHNV
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1879IAKX
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 388
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX3-SC2_snATAC_S4_R1
md5sum
e7fa7e9b8f5ffaab63346839f4484c8a
Content MD5sum
0e935edfee6d827ad977eea82904a701
File Size
6.5 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX3-SC2/BHM2VLDSX2/XHLT1-POOL-XX3-SC2-ATAC_S10_L004_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
388
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
209039121
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4434DRKC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples