Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1867JIWE
IGVFFI1867JIWE
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8551
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8551_R1
md5sum
71a4639f0fcbcdd3757282cc9f9d7aeb
Content MD5sum
d8b434f6b2e24b3bc1d4f277e5a91b23
File Size
2.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2285_L2_SS-PKR-177_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8551
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
49232367
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3042QHWY
yaml
seqspec
seqspec of IGVFFI1867JIWE, IGVFFI3059KMJY, IGVFFI7168CNHL
Jason Buenrostro, Broad
1.3 KB
validated