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IGVFFI1865PQVY

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5867EPVA(scRNA-seq)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20240212_GEX_NGS_1_LAF7052A8_L002_I2
md5sum
a6cdd0dabac56fcd96f1e581bd91f154
Content MD5sum
5b367aab55652b3b78a72d1ecf419138
File Size
2.0 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20240318_PerturbSeq_2/Singh_021224_1_Pool_5Pv2_GEX_LAF7052A8_S28_L002_I2_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
302027125

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 12 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
1.2 GB
validated