Home

IGVFFI1858UNPS

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6899OQTS(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X032_G2_P031_L003_I1
md5sum
7a7a827fe93ccba208c0d6fe26055557
Content MD5sum
0f867fc10d9645d86a519476e5f703dd
File Size
1.8 GB
Submitted File Name
Multiome_ATAC_X032_G2_L002_P031_S38_L003_I1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HV7VHDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
8
Read Count
265005945

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 83 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (female, 70 years) substantia nigra tissue associated with cerebral amyloid angiopathy; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF