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INDEXED
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SequenceFile
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IGVFFI1857LXJV
IGVFFI1857LXJV
released
validated
Json view
File Set
IGVFDS3548TJJM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9182
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9182_R1
md5sum
c007ddeda4df834f3ddcdc6a0cf07f48
Content MD5sum
95cca16e4d6ce2c9cdedbe10b6741349
File Size
618 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2340_L8_SS-PKR-206_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9182
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
13535890
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6043MNJX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3949HJSH
yaml
seqspec
seqspec of IGVFFI1857LXJV, IGVFFI5338LUXF, IGVFFI0489RBMU
Jason Buenrostro, Broad
1.3 KB
validated