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INDEXED
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SequenceFile
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IGVFFI1843JIVA
IGVFFI1843JIVA
released
validated
Json view
File Set
IGVFDS6800SAZW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8891
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8891_R1
md5sum
855910e31b5dbc73b351e5f4c4fbc403
Content MD5sum
64f1b58a15ee72e15847a54a81852040
File Size
754 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2337_L5_SS-PKR-206_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8891
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
16664975
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4044EEDT
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 206)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8088AUDZ
yaml
seqspec
seqspec of IGVFFI1843JIVA, IGVFFI5832VGJL, IGVFFI0963ITKH
Jason Buenrostro, Broad
1.3 KB
validated