{
"@context": "/terms/",
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],
"accession": "IGVFFI1842DABI",
"aliases": [
"jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-BioRep1-FFrep2-BinA-PCRrep1_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI1842DABI](/sequence-files/IGVFFI1842DABI/) has in progress subobject auxiliary set [IGVFDS9285PZZW](/auxiliary-sets/IGVFDS9285PZZW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI1842DABI/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "cf71a18d32c22d7d1deab37217573498",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T10:41:24.428551+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS9285PZZW/",
"file_size": 9573055,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI1842DABI/@@download/IGVFFI1842DABI.fastq.gz",
"illumina_read_type": "R2",
"index": "AGCAATTC:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "48bc5f1551ec3a76171d818396e4f426",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 230478,
"release_timestamp": "2023-12-21T00:54:41.291588+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/7ad06259-8f6c-43b4-9da6-2a04ff4dc6ba/IGVFFI1842DABI.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
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"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
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},
"submitted_file_name": "230423pPPIFEnformerJurkat-Jurkat-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep2_BinA-PCRrep1_S49_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "7ad06259-8f6c-43b4-9da6-2a04ff4dc6ba"
}