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INDEXED
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SequenceFile
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IGVFFI1830TIIG
IGVFFI1830TIIG
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7944GANE
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X051_G7_P070_L004_I1
md5sum
2c699aeec376184a647153b4321d6273
Content MD5sum
ec1340ed4a952d3e32e32f3ddd3d7208
File Size
904 MB
Submitted File Name
Multiome_RNA_X051_G7_L007_P070_S35_L004_I1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19RTCA4LE
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
10
Read Count
128967158
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9972OZUY
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 80 years) cerebellar cortex tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 8 more samples