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INDEXED
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IGVFFI1829KRZT
IGVFFI1829KRZT
released
validated
Json view
File Set
IGVFDS3991RWMW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1441
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1441_R1
buenrostro-bernstein:SS-LS_1441_R1
md5sum
a2c7eca9d3b328898cc098bdd900ae68
Content MD5sum
d69d5b962b961cadf3bc543ff2ec081e
File Size
29 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1130_L1_SS-PKR-6_SS-V2-PLATE2-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1441
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
1158
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1036KMAA
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (49 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad