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INDEXED
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SequenceFile
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IGVFFI1808UVLN
IGVFFI1808UVLN
released
validated
Json view
File Set
IGVFDS3442XUWG
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4362
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4362_R1
md5sum
495a9ecb19cf4f31476811445a071510
Content MD5sum
f0365ac1d8cd429e5d15167d1e094355
File Size
3.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-533_L2_SS-PKR-170_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4362
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
50590607
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9117YPYG
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4684TKLV
yaml
seqspec
seqspec of IGVFFI1808UVLN, IGVFFI3104SVIZ, IGVFFI9516UAJT
Jason Buenrostro, Broad
1.3 KB
validated