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INDEXED
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SequenceFile
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IGVFFI1801NWGU
IGVFFI1801NWGU
released
validated
Json view
File Set
IGVFDS0020LQRY
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 241
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2031_R2
bradley-bernstein:SS-LS_241_R2
buenrostro-bernstein:SS-LS_2031_R2
buenrostro-bernstein:SS-LS_241_R2
md5sum
e57e74bff2b5d78d46dc6dcb84709e35
Content MD5sum
c66e271a7d844d543394f67c3711f90a
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-156_L2_SS-PKR-129_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
241
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
23198218
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7473ZEJG
yaml
seqspec
seqspec of IGVFFI9218BUCK, IGVFFI1801NWGU
Jason Buenrostro, Broad
1.2 KB
validated