IGVFFI1799NHWX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4343EECQ(single-nucleus ATAC-seq (10x multiome))

Summary

R3 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP001_G6_P051_L007_R3

md5sum

f271d992374850cfa786d1614a2a7af6

Content MD5sum

a718d6d1bb79c35d713a353a5f3fe74b

File Size

2.1 GB

Submitted File Name

Multiome_ATAC_RP001_G6_L006_P051_S26_L007_R3_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JL2LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

71790295

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4020DOCK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples