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INDEXED
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SequenceFile
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IGVFFI1796FSNS
IGVFFI1796FSNS
released
validated
Json view
File Set
IGVFDS1243NBLH
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P016-R2
md5sum
978aa73d99395659216233d62ffcbe89
Content MD5sum
1dfe125c975ae36e1dd684e850471781
File Size
7.7 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool16.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
49478441
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5206MZCI
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.6 GB
validated
IGVFFI5820VTXJ
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.9 GB
validated