IGVFFI1784CNMN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5090MUJO(single-nucleus ATAC-seq (10x multiome))

Summary

R3 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP025_G3_P069_L003_R3

md5sum

7a750ff2b0efdfcf4697ddbf79a531c2

Content MD5sum

e5a53d9a1089e87f754934b583a72793

File Size

13 GB

Submitted File Name

Multiome_ATAC_RP025_G3_L003_P069_S3_L003_R3_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

150

Read Count

197106517

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4296CDRL

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 8 more samples