IGVFFI1763VDEU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9631IEFU(single-nucleus ATAC-seq (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP031_G2_P079_L007_I1

md5sum

5667cc1c4d7da8a6ac87e42644bcbffe

Content MD5sum

e906ff53ff8b507fc259b761baf7a8b5

File Size

1.0 GB

Submitted File Name

Multiome_ATAC_RP031_G2_L002_P079_S10_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19U7CA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

124187026

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2932RFCB

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 70 years) putamen tissue associated with Parkinson's disease; ... and 6 more samples