IGVFFI1761NULS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0478RINN(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G3_P072_L008_R1

md5sum

325ad857e2f16d3f6f257f18af6ff7f4

Content MD5sum

80c29187ac4af43d8b7386558cd633b3

File Size

17 GB

Submitted File Name

Multiome_RNA_X053_G3_L003_P072_S67_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

192384408

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2566PNRB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples